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Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (C2 crystal form)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 10-12% PEG 10000; 0.1 M HEPES-HAOH PH 4.7-6.1; 0-10% GLYCEROL
Crystal Properties Matthews coefficient Solvent content 2.65 53.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 216.836 α = 90 b = 58.649 β = 101.5 c = 57.591 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MAR165 FLAT AND TOROIDAL MIRROR 2006-02-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM16 ESRF BM16
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 25 93.8 0.05 20.9 3.1 88294
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.66 73 0.38 2.3 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.6 16 85836 2034 94 0.18 0.18 0.1761 0.213 0.2093 SHELLS 25.91
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.38 -0.29 3.15 -1.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.213 r_dihedral_angle_4_deg 15.91 r_dihedral_angle_3_deg 13.081 r_dihedral_angle_1_deg 6.528 r_scangle_it 3.348 r_scbond_it 2.468 r_mcangle_it 2.081 r_angle_refined_deg 1.618 r_mcbond_it 1.464 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.213 r_dihedral_angle_4_deg 15.91 r_dihedral_angle_3_deg 13.081 r_dihedral_angle_1_deg 6.528 r_scangle_it 3.348 r_scbond_it 2.468 r_mcangle_it 2.081 r_angle_refined_deg 1.618 r_mcbond_it 1.464 r_nbtor_refined 0.308 r_nbd_refined 0.199 r_xyhbond_nbd_refined 0.137 r_symmetry_vdw_refined 0.137 r_symmetry_hbond_refined 0.129 r_chiral_restr 0.106 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4797 Nucleic Acid Atoms Solvent Atoms 857 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SHELXDE phasing