X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.64295PEG3000, pH 5.64, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
3.3262.92

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.342α = 90
b = 62.342β = 90
c = 95.257γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42005-05-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE AR-NW12A1.00000Photon FactoryAR-NW12A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.195096.65868233
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.191.23100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.19205868255768296896.60.212840.21110.24407RANDOM24.228
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.03-0.030.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.632
r_dihedral_angle_4_deg22.406
r_dihedral_angle_3_deg12.199
r_dihedral_angle_1_deg6.547
r_sphericity_bonded4.427
r_scbond_it4.232
r_scangle_it4.179
r_rigid_bond_restr3.868
r_sphericity_free3.781
r_mcangle_it2.177
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.632
r_dihedral_angle_4_deg22.406
r_dihedral_angle_3_deg12.199
r_dihedral_angle_1_deg6.547
r_sphericity_bonded4.427
r_scbond_it4.232
r_scangle_it4.179
r_rigid_bond_restr3.868
r_sphericity_free3.781
r_mcangle_it2.177
r_angle_refined_deg1.457
r_mcbond_it1.444
r_nbtor_refined0.306
r_nbd_refined0.192
r_symmetry_vdw_refined0.164
r_xyhbond_nbd_refined0.134
r_symmetry_hbond_refined0.113
r_chiral_restr0.085
r_bond_refined_d0.012
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms918
Nucleic Acid Atoms
Solvent Atoms341
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
AMoREphasing