☰ Navigation Tabs
High resolution structure of barley Bowman-Birk inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.64 295 PEG3000, pH 5.64, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.32 62.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.342 α = 90 b = 62.342 β = 90 c = 95.257 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2005-05-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A 1.00000 Photon Factory AR-NW12A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.19 50 96.6 58682 3 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.19 1.23 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.19 20 58682 55768 2968 96.6 0.21284 0.2111 0.2123 0.24407 0.2159 RANDOM 24.228
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.03 0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.632 r_dihedral_angle_4_deg 22.406 r_dihedral_angle_3_deg 12.199 r_dihedral_angle_1_deg 6.547 r_sphericity_bonded 4.427 r_scbond_it 4.232 r_scangle_it 4.179 r_rigid_bond_restr 3.868 r_sphericity_free 3.781 r_mcangle_it 2.177
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.632 r_dihedral_angle_4_deg 22.406 r_dihedral_angle_3_deg 12.199 r_dihedral_angle_1_deg 6.547 r_sphericity_bonded 4.427 r_scbond_it 4.232 r_scangle_it 4.179 r_rigid_bond_restr 3.868 r_sphericity_free 3.781 r_mcangle_it 2.177 r_angle_refined_deg 1.457 r_mcbond_it 1.444 r_nbtor_refined 0.306 r_nbd_refined 0.192 r_symmetry_vdw_refined 0.164 r_xyhbond_nbd_refined 0.134 r_symmetry_hbond_refined 0.113 r_chiral_restr 0.085 r_bond_refined_d 0.012 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 918 Nucleic Acid Atoms Solvent Atoms 341 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling AMoRE phasing