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Triclinic cross-linked lysozyme soaked in bromoethanol 1M
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2F2N
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 300 SODIUM NITRATE AS CRYSTALLIZING AGENT CROSS-LINKED BY VAPOR DIFFUSION WITH GLUTARALDEHYDE, PROTEIN 20 MG/ML, pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 300K
Crystal Properties Matthews coefficient Solvent content 1.81 31.78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.13 α = 88.96 b = 31.75 β = 108.42 c = 34.19 γ = 111.47
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE MARRESEARCH SI(111) CURVATED MIRROR 2002-03-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON LURE BEAMLINE DW32 0.964 LURE DW32
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.654 10 90.1 11237 10770 2 4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.654 1.8 90.7
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS 2F2N 1.654 10 4 2 11237 10770 94.3 0.178 0.1645 0.18 0.1682
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 909 1085
RMS Deviations Key Refinement Restraint Deviation s_similar_adp_cmpnt 0.059 s_non_zero_chiral_vol 0.046 s_zero_chiral_vol 0.041 s_anti_bump_dis_restr 0.031 s_from_restr_planes 0.0258 s_angle_d 0.024 s_bond_d 0.008 s_similar_dist s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 16
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX model building SHELXL-97 refinement SHELX phasing