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Crystal structure of mouse carnosinase CN2 complexed with MN and bestatin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.4 277 20% PEG 3350, 20% GLYCEROL, 0.2M HF, 25MH TRIS-HCL, 50MM NACL, 0.2MM MNCL2, 1MM DTT, 30MM BESTATIN, pH 7.40, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.46 50.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.496 α = 90 b = 199.181 β = 118.92 c = 55.215 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-02-07 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A 1.8926, 1.8941, 1.7926 Photon Factory AR-NW12A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 86.8 0.058 6.6 39799 46.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.38 30.9 0.235 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.3 43.03 37748 2016 86.9 0.194 0.192 0.1907 0.239 0.2372 RANDOM 46.17
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.02 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.179 r_dihedral_angle_4_deg 23.006 r_dihedral_angle_3_deg 16.296 r_dihedral_angle_1_deg 6.29 r_scangle_it 3.641 r_scbond_it 2.202 r_mcangle_it 1.47 r_angle_refined_deg 1.424 r_mcbond_it 0.876 r_symmetry_vdw_refined 0.317
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.179 r_dihedral_angle_4_deg 23.006 r_dihedral_angle_3_deg 16.296 r_dihedral_angle_1_deg 6.29 r_scangle_it 3.641 r_scbond_it 2.202 r_mcangle_it 1.47 r_angle_refined_deg 1.424 r_mcbond_it 0.876 r_symmetry_vdw_refined 0.317 r_nbtor_refined 0.304 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.18 r_chiral_restr 0.097 r_symmetry_hbond_refined 0.068 r_bond_refined_d 0.013 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7458 Nucleic Acid Atoms Solvent Atoms 472 Heterogen Atoms 48
Software Software Software Name Purpose SHARP phasing REFMAC refinement HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling