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Structure of the C-terminal domain of BamC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 25% PEG1000, 0.1 M MES PH 6.5
Crystal Properties Matthews coefficient Solvent content 1.72 27.78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 29.74 α = 90 b = 59.12 β = 116.37 c = 31.06 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.28 1.31 98.4 0.06 10.3 5.2 25297 2.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.28 1.31 95.6 0.57 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT NONE 1.25 29.56 25297 1332 100 0.14828 0.14643 0.4769 0.18387 0.4797 RANDOM 13.829
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.13 0.48 -0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.347 r_dihedral_angle_4_deg 19.244 r_dihedral_angle_3_deg 15.571 r_scangle_it 9.119 r_scbond_it 6.29 r_dihedral_angle_1_deg 6.241 r_mcangle_it 4.325 r_mcbond_it 2.884 r_rigid_bond_restr 2.582 r_angle_refined_deg 2.157
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.347 r_dihedral_angle_4_deg 19.244 r_dihedral_angle_3_deg 15.571 r_scangle_it 9.119 r_scbond_it 6.29 r_dihedral_angle_1_deg 6.241 r_mcangle_it 4.325 r_mcbond_it 2.884 r_rigid_bond_restr 2.582 r_angle_refined_deg 2.157 r_angle_other_deg 1.197 r_mcbond_other 0.951 r_chiral_restr 0.157 r_bond_refined_d 0.029 r_gen_planes_refined 0.012 r_bond_other_d 0.005 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 916 Nucleic Acid Atoms Solvent Atoms 60 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement SHARP phasing DM phasing BUCCANEER phasing