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CBM62 FROM CLOSTRIDIUM THERMOCELLUM XYL5A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.8 20 % (W/V) PEG 3350, 0.2 M TRI-SODIUM CITRATE, PH 4.8
Crystal Properties Matthews coefficient Solvent content 4.95 75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 192.16 α = 90 b = 192.16 β = 90 c = 192.16 γ = 90
Symmetry Space Group F 4 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 RIGAKU R-AXIS IV OSMIC MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 48.04 100 0.07 33.7 15.7 37038 2 14.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.74 99.8 0.41 7.1 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT NONE 1.65 110.94 35140 1848 99.82 0.15173 0.15118 0.1523 0.16244 0.1628 RANDOM 13
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.428 r_dihedral_angle_3_deg 9.726 r_dihedral_angle_1_deg 5.564 r_dihedral_angle_4_deg 4.408 r_scangle_it 3.365 r_scbond_it 2.083 r_mcangle_it 1.499 r_angle_refined_deg 1.424 r_mcbond_it 0.838 r_chiral_restr 0.115
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.428 r_dihedral_angle_3_deg 9.726 r_dihedral_angle_1_deg 5.564 r_dihedral_angle_4_deg 4.408 r_scangle_it 3.365 r_scbond_it 2.083 r_mcangle_it 1.499 r_angle_refined_deg 1.424 r_mcbond_it 0.838 r_chiral_restr 0.115 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1058 Nucleic Acid Atoms Solvent Atoms 226 Heterogen Atoms 13
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling SHELXCDE phasing