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TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND ANTAGONIST IODOCYANOPINDOLOL
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2VT4 PDB ENTRY 2VT4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 pH 7.0
Crystal Properties Matthews coefficient Solvent content 3.48 64.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 177.855 α = 90 b = 56.298 β = 116.39 c = 110.939 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2007-12-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-2 ESRF ID23-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.65 41.3 99.7 0.1 9.6 3.7 11215 2 71.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.65 3.71 100 0.51 3.3 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2VT4 3.65 41.31 10678 536 100 0.25005 0.24903 0.27046 0.2782 RANDOM 90.037
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.86 -2.58 -6.82 3.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 24.268 r_scangle_it 12.096 r_dihedral_angle_3_deg 11.66 r_scbond_it 8.13 r_dihedral_angle_4_deg 7.008 r_mcangle_it 6.278 r_mcbond_it 3.56 r_dihedral_angle_1_deg 3.541 r_mcbond_other 1.337 r_angle_refined_deg 0.925
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 24.268 r_scangle_it 12.096 r_dihedral_angle_3_deg 11.66 r_scbond_it 8.13 r_dihedral_angle_4_deg 7.008 r_mcangle_it 6.278 r_mcbond_it 3.56 r_dihedral_angle_1_deg 3.541 r_mcbond_other 1.337 r_angle_refined_deg 0.925 r_angle_other_deg 0.864 r_chiral_restr 0.05 r_bond_refined_d 0.011 r_bond_other_d 0.007 r_gen_planes_refined 0.003 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4648 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing