☰ Navigation Tabs
Structural basis for AMSH-ESCRT-III CHMP3 interaction
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 3.3 MG/ML OF AMSH PROTEIN IN 10 MM HEPES PH 8.0, 100 MM NACL WAS MIXED WITH AN EQUAL VOLUME WELL CONDITION: 2.2 M SODIUM MALONATE,WITH 30 % GLYCEROL AS CRYO-PROTECTANT
Crystal Properties Matthews coefficient Solvent content 2.7 54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.97 α = 90 b = 45.97 β = 90 c = 206.91 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r TORODIAL FOCUSING MIRROR 2009-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.9760, 0.9795 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 44.85 99.8 0.08 5.1 3.3 141404
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.84 100 0.64 1.2 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.75 51.71 40725 2164 99.73 0.19333 0.19163 0.1935 0.22694 0.2281 RANDOM 30.212
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.51 0.51 -1.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.884 r_dihedral_angle_4_deg 14.998 r_dihedral_angle_3_deg 13.394 r_scangle_it 4.961 r_dihedral_angle_1_deg 4.699 r_scbond_it 3.064 r_mcangle_it 1.817 r_angle_refined_deg 1.298 r_mcbond_it 1.136 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.884 r_dihedral_angle_4_deg 14.998 r_dihedral_angle_3_deg 13.394 r_scangle_it 4.961 r_dihedral_angle_1_deg 4.699 r_scbond_it 3.064 r_mcangle_it 1.817 r_angle_refined_deg 1.298 r_mcbond_it 1.136 r_nbtor_refined 0.3 r_symmetry_vdw_refined 0.221 r_nbd_refined 0.205 r_xyhbond_nbd_refined 0.19 r_symmetry_hbond_refined 0.159 r_chiral_restr 0.091 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2643 Nucleic Acid Atoms Solvent Atoms 386 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling Auto-Rickshaw phasing