2XY8
Paramagnetic-based NMR structure of the complex between the N- terminal epsilon domain and the theta domain of the DNA polymerase III
SOLUTION NMR
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
DATA-DRIVEN FLEXIBLE DOCKING | RUNNING WITHIN HADDOCK2.1-PARA BETA. REFINEMENT DETAILS CAN BE FOUND AT THE FOLLOWING PUBLICATION: DE VRIES ET AL. PROTEINS 2007 (REFERENCE 3 IN REMARK 1). | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | TOP 10 STRUCTURES OF THE BEST CLUSTER |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | THE COMPLEX WAS DOCKED USING PSEUDOCONTACT SHIFT ( PCS) RESTRAINTS.THE CONTENTS OF THE SAMPLE ARE SIMILAR TO THAT DESCRIBED IN LANTHANIDE LABELING OFFERS-FAST NMR APPROACH TO 3D STRUCTRE DETERMINATIONS OF PROTEIN-PROTEIN COMPLEXES. PINTACUDA ET ALL. JACS 2006 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | A.T.BRUNGER,P.D.ADAMS,G.M.CLORE, W.L.DELANO,P.GROS,R.W.GROSSE-KUNSTLEVE, J.-S.JIANG,J.KUSZEWSKI,M.NILGES,N.S.PANNU, R.J.READ,L.M.RICE,T.SIMONSON,G.L.WARREN | |
2 | structure solution | HADDOCK2.1-PARA BETA | BETA | DE VRIES |