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X-RAY STRUCTURE OF ZNUA-WT FROM SALMONELLA ENTERICA
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2PRS PDB ENTRY 2PRS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 AMMONIUM SULPHATE 2.5 M, HEPES 0.1 M PH 7.5, PEG 400 2% .
Crystal Properties Matthews coefficient Solvent content 2.74 54.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 143.65 α = 90 b = 143.65 β = 90 c = 30.811 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2009-11-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 99.7 0.07 32.19 11.6 40175 -3 24.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.76 100 0.4 5.3 11.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2PRS 1.71 50 38139 2009 99.62 0.21115 0.20939 0.2065 0.24402 0.2397 RANDOM 27.805
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.16 0.32 -0.49
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.558 r_dihedral_angle_4_deg 17.779 r_dihedral_angle_3_deg 14.651 r_dihedral_angle_1_deg 5.48 r_scangle_it 3.14 r_scbond_it 2.074 r_mcangle_it 1.368 r_angle_refined_deg 1.226 r_mcbond_it 0.758 r_chiral_restr 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.558 r_dihedral_angle_4_deg 17.779 r_dihedral_angle_3_deg 14.651 r_dihedral_angle_1_deg 5.48 r_scangle_it 3.14 r_scbond_it 2.074 r_mcangle_it 1.368 r_angle_refined_deg 1.226 r_mcbond_it 0.758 r_chiral_restr 0.09 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2062 Nucleic Acid Atoms Solvent Atoms 203 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling MOLREP phasing