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Vibrio cholerae colonization factor GbpA crystal structure
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 0.2 M MG(HCO3)2, 50% (W/V) PEG 3350, 3.33% (W/V) D-SORBITOL, PH 7.5
Crystal Properties Matthews coefficient Solvent content 1.9 40
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.955 α = 90 b = 120.182 β = 108.41 c = 67.177 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2006-10-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 20 96.1 0.05 14.4 3 73728 2 28.69
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 91.6 0.33 3 2.8
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD NONE 1.8 19.94 1.34 72993 738 95.2 0.207 0.207 0.246 0.25 36.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.5197 0.4001 -0.4323 -0.0875
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 18.761 f_angle_d 1.124 f_chiral_restr 0.079 f_bond_d 0.008 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6014 Nucleic Acid Atoms Solvent Atoms 630 Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing