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Human serum albumin complexed with dansyl-L-sarcosine
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BXA PDB ENTRY 2BXA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 SEE PAPER, pH 7
Crystal Properties Matthews coefficient Solvent content 2.6 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.485 α = 81.15 b = 55.355 β = 90.21 c = 120.738 γ = 65.01
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MAR555 FLAT PANEL MIRRORS 2005-06-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 52 96.9 0.11 6.6 1.9 27597 46.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 3.08 98.4 0.37 2.1 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2BXA 2.9 47.53 27563 1332 96.9 0.22 0.22 0.2201 0.257 0.2564 RANDOM 72.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 7.11 -4.99 8.98 3.39 -6.21 -10.51
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 25.29 c_scbond_it 21.12 c_dihedral_angle_d 19.9 c_mcangle_it 2.21 c_angle_deg 1.3 c_mcbond_it 1.27 c_improper_angle_d 0.87 c_bond_d 0.009 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 25.29 c_scbond_it 21.12 c_dihedral_angle_d 19.9 c_mcangle_it 2.21 c_angle_deg 1.3 c_mcbond_it 1.27 c_improper_angle_d 0.87 c_bond_d 0.009 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8305 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 44
Software Software Software Name Purpose CNS refinement MOSFLM data reduction SCALA data scaling CNS phasing