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Crystal Structure of the BRMS1 N-terminal region
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2CCF PDB ENTRY 2CCF
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.25 0.1 M SODIUM CITRATE PH 5.25, 1.5 M AMMONIUM SULPHATE
Crystal Properties Matthews coefficient Solvent content 1.95 37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.399 α = 90 b = 60.399 β = 90 c = 133.485 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r MIRRORS 2008-11-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.91 48.7 99.7 0.04 79.3 40.4 7517 -3 33.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.91 2.02 100 0.28 14.5 30.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2CCF 1.912 48.701 7517 346 99.602 0.204 0.2 0.2022 0.2754 0.2881 RANDOM 43.555
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.128 0.064 0.128 -0.191
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.573 r_dihedral_angle_3_deg 19.82 r_dihedral_angle_4_deg 11.749 r_scangle_it 3.574 r_dihedral_angle_1_deg 3.29 r_scbond_it 2.452 r_mcangle_it 1.56 r_angle_refined_deg 1.478 r_mcbond_it 1.072 r_nbtor_refined 0.296
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.573 r_dihedral_angle_3_deg 19.82 r_dihedral_angle_4_deg 11.749 r_scangle_it 3.574 r_dihedral_angle_1_deg 3.29 r_scbond_it 2.452 r_mcangle_it 1.56 r_angle_refined_deg 1.478 r_mcbond_it 1.072 r_nbtor_refined 0.296 r_xyhbond_nbd_refined 0.261 r_symmetry_vdw_refined 0.249 r_nbd_refined 0.224 r_symmetry_hbond_refined 0.152 r_chiral_restr 0.105 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 706 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 7
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing