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Structure of the pentapeptide repeat protein AlbG, a resistance factor for the topoisomerase poison albicidin.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.3 COMBINING NATIVE PROTEIN, 2 UL OF 20 MG ML-1, 20 MM TRIS PH 8.0, 1 MM DTT WITH PRECIPITANT, 2 UL OF 1 M MGSO4, 100 MM LISO4, 100 MM ADA PH 6.3
Crystal Properties Matthews coefficient Solvent content 2.42 51.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.71 α = 90 b = 90.242 β = 100.94 c = 55.983 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE RIGAKU-MSC RAXIS IV MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 99.4 0.03 24.8 2.9 29136 24.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 98.7 0.11 8.7 2.7
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD NONE 1.999 22.56 28848 1456 98.44 0.1661 0.1634 0.1604 0.215 0.2118
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.3954 7.0819 -4.6858 7.0811
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 12.906 f_angle_d 1.204 f_chiral_restr 0.087 f_bond_d 0.01 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3115 Nucleic Acid Atoms Solvent Atoms 198 Heterogen Atoms 20
Software Software Software Name Purpose PHENIX refinement MOSFLM data reduction SCALA data scaling PHENIX phasing