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Structure of the bacterial cell division regulator protein MipZ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.1 M MES/NAOH PH6.5, 30% V/V PEG400
Crystal Properties Matthews coefficient Solvent content 2.5 50.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.334 α = 90 b = 81.334 β = 90 c = 124.206 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2007-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 20.69 99.6 0.09 11.6 5.4 40200 18.813
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.69 100 0.29 5.1 5.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.6 61.31 38271 1993 99.59 0.12863 0.12621 0.13 0.17531 0.1313 RANDOM 23.685
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.35 -0.18 -0.35 0.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.159 r_dihedral_angle_4_deg 24.081 r_dihedral_angle_3_deg 14.792 r_sphericity_free 13.631 r_scangle_it 8.635 r_sphericity_bonded 8.589 r_scbond_it 6.234 r_dihedral_angle_1_deg 5.306 r_mcangle_it 4.244 r_rigid_bond_restr 3.831
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.159 r_dihedral_angle_4_deg 24.081 r_dihedral_angle_3_deg 14.792 r_sphericity_free 13.631 r_scangle_it 8.635 r_sphericity_bonded 8.589 r_scbond_it 6.234 r_dihedral_angle_1_deg 5.306 r_mcangle_it 4.244 r_rigid_bond_restr 3.831 r_mcbond_it 3.158 r_angle_refined_deg 2.474 r_symmetry_hbond_refined 0.368 r_nbtor_refined 0.325 r_nbd_refined 0.254 r_xyhbond_nbd_refined 0.249 r_chiral_restr 0.233 r_symmetry_vdw_refined 0.15 r_bond_refined_d 0.03 r_gen_planes_refined 0.013 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2104 Nucleic Acid Atoms Solvent Atoms 353 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SCALA data scaling SHELXD phasing