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High resolution structure of MTSL-tagged CylR2.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1UTX PDB ENTRY 1UTX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 VAPOUR DIFFUSION 50MM HEPES PH 7.0, 0.2M NACL
Crystal Properties Matthews coefficient Solvent content 2.8 56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.353 α = 90 b = 63.353 β = 90 c = 40.972 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2009-06-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 44.8 99 0.04 31.77 8.07 25981
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.6 98 0.17 10.01 7.38
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE PDB ENTRY 1UTX 1.5 44.8 25981 1318 99.1 0.1471 0.1415 0.1457 0.1967 0.195 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 19 1125.43 1216.12
RMS Deviations Key Refinement Restraint Deviation s_from_restr_planes 0.367 s_zero_chiral_vol 0.063 s_similar_adp_cmpnt 0.053 s_non_zero_chiral_vol 0.051 s_approx_iso_adps 0.043 s_anti_bump_dis_restr 0.03 s_angle_d 0.028 s_bond_d 0.009 s_rigid_bond_adp_cmpnt 0.003 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1064 Nucleic Acid Atoms Solvent Atoms 129 Heterogen Atoms 30
Software Software Software Name Purpose SHELXL-97 refinement XDS data reduction SADABS data scaling PHASER phasing