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Crystal Structure of E.coli BglA
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1XK6 PDB ENTRY 1XK6
Crystallization Crystal Properties Matthews coefficient Solvent content 2.34 47.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.674 α = 99.96 b = 79.424 β = 107.21 c = 98.604 γ = 102.83
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2008-01-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 22.9 92.7 0.14 7.9 4 83032 -10 19.95
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 66.3 0.53 2.2 3.9
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1XK6 2.3 22.94 1.96 82815 4153 92.7 0.174 0.171 0.1559 0.236 0.1558
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.1095 0.5992 -0.6773 0.5269 1.3906 0.5827
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.998 f_angle_d 0.704 f_chiral_restr 0.054 f_bond_d 0.003 f_plane_restr 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15278 Nucleic Acid Atoms Solvent Atoms 1648 Heterogen Atoms 44
Software Software Software Name Purpose PHENIX refinement XDS data reduction XSCALE data scaling PHASER phasing