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Complex of Rabbit Endogenous Lentivirus (RELIK)Capsid with Cyclophilin A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 16-26% PEG3350, 0.1M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 2.07 45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.158 α = 90 b = 117.158 β = 90 c = 49.655 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 25 96.8 0.05 71.4 21.2 35238 2 30.39
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 94.1 0.6 4.4 11.8
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.8 24.482 1.34 35141 1756 96.86 0.1574 0.1558 0.1874 0.1877 35.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.6015 1.6015 -3.2031
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.66 f_angle_d 0.931 f_chiral_restr 0.063 f_bond_d 0.005 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2237 Nucleic Acid Atoms Solvent Atoms 367 Heterogen Atoms 12
Software Software Software Name Purpose PHENIX refinement DENZO data reduction SCALEPACK data scaling PHASER phasing