2XEB
NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
2 | 2D 1H-15N HSQC | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
3 | 3D HCN | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
4 | 2D 1H-13C HSQC | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
5 | 2D 1H-15N HSQC | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
6 | 2D | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
7 | 3D 13C-EDITED | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
8 | 13C- FILTERED NOESY | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
9 | 3D HCCH- COSY-TOCSY | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
10 | 3D HCCH-E.COSY | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
11 | 2D 15N HSQC | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 298.0 | ||
12 | 15N- FILTERED NOESY | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 278.0 | ||
13 | 3D HCN | 90% H2O/10% D2O, 100% D2O | 120 | 7.6 | 1.0 atm | 278.0 | ||
14 | 3D-HCP | 90% H2O/10% D2O, 100% D2O | ||||||
15 | 3D-ECOSY | 90% H2O/10% D2O, 100% D2O | ||||||
16 | 2D-HNN- COSY | 90% H2O/10% D2O, 100% D2O | ||||||
17 | 2D 15N-FILTERED NOESY | 90% H2O/10% D2O, 100% D2O |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 900 |
2 | Bruker | AVANCE | 800 |
3 | Bruker | AVANCE | 700 |
4 | Bruker | AVANCE | 600 |
5 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
RDC REFINEMENT, WATER REFINEMENT | ARIA-CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | LOWEST ENERGY STRUCTURES |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | NONE |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | ARIA-CNS | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN | |
2 | structure solution | ARIA CNS 1.2 | 1.1 |