☰ Navigation Tabs
Crystal structure of HCV NS3 protease with a boronate inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277 INHIBITOR SOAKED INTO CRYSTAL GENERATED ACCORDING TO KIM ET AL. (1996) CELL, 87, 343-355, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.0K
Crystal Properties Matthews coefficient Solvent content 3.9 68.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 225.889 α = 90 b = 225.889 β = 90 c = 75.196 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2008-05-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.47 70 100 0.11 11.4 7.2 26049
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.47 2.6 100 0.58 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 2.48 70.19 24721 1326 100 0.19529 0.19363 0.1889 0.22608 0.2202 RANDOM 45.626
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.88 -0.44 -0.88 1.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.405 r_dihedral_angle_4_deg 17.485 r_dihedral_angle_3_deg 16.879 r_dihedral_angle_1_deg 6.234 r_scangle_it 5.337 r_scbond_it 3.376 r_mcangle_it 2.937 r_mcbond_it 1.499 r_angle_refined_deg 1.479 r_chiral_restr 0.086
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.405 r_dihedral_angle_4_deg 17.485 r_dihedral_angle_3_deg 16.879 r_dihedral_angle_1_deg 6.234 r_scangle_it 5.337 r_scbond_it 3.376 r_mcangle_it 2.937 r_mcbond_it 1.499 r_angle_refined_deg 1.479 r_chiral_restr 0.086 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2726 Nucleic Acid Atoms Solvent Atoms 115 Heterogen Atoms 50
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling REFMAC phasing