☰ Navigation Tabs
Crystal structure of PcrH in complex with the chaperone binding region of PopD
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 0.1 M TRIS-HCL PH 8.0, 1.5 M LICL, 16% PEG6000
Crystal Properties Matthews coefficient Solvent content 1.85 44.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.37 α = 90 b = 97.72 β = 90 c = 73.59 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2009-11-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 50 99.8 0.07 29.19 14 26728 -3 35.706
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.96 99.4 0.7 4.7 14
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.85 40.7 25212 2826 99.91 0.23319 0.22991 0.2336 0.26218 0.2719 RANDOM 32.511
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 2.66 -2.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.339 r_dihedral_angle_4_deg 19.319 r_dihedral_angle_3_deg 17.109 r_dihedral_angle_1_deg 4.995 r_scangle_it 4.826 r_scbond_it 3.175 r_mcangle_it 1.897 r_angle_refined_deg 1.731 r_mcbond_it 1.075 r_chiral_restr 0.116
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.339 r_dihedral_angle_4_deg 19.319 r_dihedral_angle_3_deg 17.109 r_dihedral_angle_1_deg 4.995 r_scangle_it 4.826 r_scbond_it 3.175 r_mcangle_it 1.897 r_angle_refined_deg 1.731 r_mcbond_it 1.075 r_chiral_restr 0.116 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2097 Nucleic Acid Atoms Solvent Atoms 95 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling PHASER phasing