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Crystal structure of GmhA from Burkholderia pseudomallei in complex with product
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 0.05 M SODIUM ACETATE PH 4.6, 4% PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.31 46.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.2 α = 90 b = 83.68 β = 90 c = 126.1 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2009-09-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.9763,1.283 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.62 47.8 94.4 0.09 13.1 6.5 93361 14.41
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.62 1.71 71.8 0.63 2.2 4.4
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD NONE 1.62 47.772 0.01 89502 4487 90.44 0.148 0.1464 0.1458 0.179 0.1764 19.71
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 6.9327 -0.204 -6.7287
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 19.221 f_angle_d 1.015 f_chiral_restr 0.075 f_bond_d 0.006 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5716 Nucleic Acid Atoms Solvent Atoms 941 Heterogen Atoms 106
Software Software Software Name Purpose PHENIX refinement MOSFLM data reduction SCALA data scaling SHELXCDE phasing