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Evolutionary basis of HIV restriction by the antiretroviral TRIMCyp
Crystallization Crystal Properties Matthews coefficient Solvent content 2 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.47 α = 90 b = 116.77 β = 90 c = 129.36 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E SUPERBRIGHT
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 20 95.7 0.1 6.6 2.9 22894 2 34.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.6 86.68 20611 1110 94.88 0.21869 0.21547 0.2171 0.27982 0.2832 RANDOM 34.087
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.07 3.15 -3.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.426 r_dihedral_angle_4_deg 20.538 r_dihedral_angle_3_deg 19.949 r_dihedral_angle_1_deg 6.589 r_scangle_it 2.901 r_scbond_it 1.727 r_angle_refined_deg 1.536 r_mcangle_it 1.063 r_mcbond_it 0.546 r_chiral_restr 0.105
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.426 r_dihedral_angle_4_deg 20.538 r_dihedral_angle_3_deg 19.949 r_dihedral_angle_1_deg 6.589 r_scangle_it 2.901 r_scbond_it 1.727 r_angle_refined_deg 1.536 r_mcangle_it 1.063 r_mcbond_it 0.546 r_chiral_restr 0.105 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4576 Nucleic Acid Atoms Solvent Atoms 56 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement