☰ Navigation Tabs
Crystal Structure of Hypothetical protein sso1986 from Sulfolobus solfataricus P2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4 19.2% PEG 6000, 0.1M NA-CITRATE, PH4.0, 0.93M LICL2, 9% ETHYLENE GLYCOL FREEZING SOLUTION: 21.0% PEG 6000, 0.1M NA-CITRATE, PH4.0, 0.5M LICL2, 25% ETHYLENE GLYCOL.DERIVATIVE CRYSTALS FOR SAD PHASING WERE OBTAINED BY SOAKING THE CRYSTALS IN 200 MM TRIMETHYLLEAD CHLORIDE, 500 MM POTASSIUM OSMATE AND 200 MM DIPOTASSIUM HEXACHLORO OSMATE
Crystal Properties Matthews coefficient Solvent content 1.97 37.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 127.933 α = 90 b = 46.183 β = 109.26 c = 62.574 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2007-09-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.05 29.54 99 0.06 4.5 4.1 20562
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.05 2.1 97.7 0.35 4.5 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2.05 29.54 20562 1085 98.68 0.19073 0.18883 0.2014 0.22682 0.2413 RANDOM 28.249
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.92 0.55 1.84 0.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.252 r_dihedral_angle_4_deg 15.29 r_dihedral_angle_3_deg 13.777 r_dihedral_angle_1_deg 6.247 r_scangle_it 1.829 r_scbond_it 1.41 r_angle_refined_deg 1.229 r_mcangle_it 0.847 r_angle_other_deg 0.824 r_mcbond_it 0.721
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.252 r_dihedral_angle_4_deg 15.29 r_dihedral_angle_3_deg 13.777 r_dihedral_angle_1_deg 6.247 r_scangle_it 1.829 r_scbond_it 1.41 r_angle_refined_deg 1.229 r_mcangle_it 0.847 r_angle_other_deg 0.824 r_mcbond_it 0.721 r_symmetry_vdw_other 0.283 r_symmetry_hbond_refined 0.247 r_symmetry_vdw_refined 0.225 r_nbd_refined 0.205 r_nbd_other 0.185 r_nbtor_refined 0.176 r_xyhbond_nbd_refined 0.162 r_mcbond_other 0.128 r_nbtor_other 0.083 r_chiral_restr 0.074 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2906 Nucleic Acid Atoms Solvent Atoms 190 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SHELXCDE phasing