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Crystal structure of malonyl-ACP (acyl carrier protein) from Bacillus subtilis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 2M (NH4)2SO4, 0.1M CITRATE-PHOSPHATE BUFFER PH 4.2
Crystal Properties Matthews coefficient Solvent content 6.89 82.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.944 α = 90 b = 96.944 β = 90 c = 98.816 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2007-11-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 48.5 99.9 0.08 32.4 23.1 6824 5 69.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.69 2.84 99.2 0.64 5.8 23.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2.69 48.47 6489 327 99.87 0.21261 0.21159 0.23297 0.2179 RANDOM 27.911
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 0.15 -0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.858 r_dihedral_angle_4_deg 27.838 r_dihedral_angle_3_deg 14.405 r_dihedral_angle_1_deg 4.705 r_scangle_it 3.429 r_scbond_it 1.966 r_angle_refined_deg 1.503 r_mcangle_it 1.093 r_mcbond_it 0.531 r_chiral_restr 0.103
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.858 r_dihedral_angle_4_deg 27.838 r_dihedral_angle_3_deg 14.405 r_dihedral_angle_1_deg 4.705 r_scangle_it 3.429 r_scbond_it 1.966 r_angle_refined_deg 1.503 r_mcangle_it 1.093 r_mcbond_it 0.531 r_chiral_restr 0.103 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 590 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling SHELX-AUTOSHARP phasing