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The crystal structure of precursor acyl coenzyme A:isopenicillin N acyltransferase from Penicillium chrysogenum
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 1.6 M (NH4)2SO4, 0.1 M NACL, 0.1 M HEPES-NAOH, PH 7.5
Crystal Properties Matthews coefficient Solvent content 2.9 57.65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 231.225 α = 90 b = 68.233 β = 129.57 c = 151.277 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 1999-06-20 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 48.92 98.5 0.04 21.51 2.93 152842 23.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.95 98.6 0.21 5.4 2.72
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 1.85 48.8 145184 7647 98.45 0.17037 0.16919 0.1893 0.19288 0.2064 RANDOM 29.853
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.54 -0.59 1.43 -0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.787 r_dihedral_angle_4_deg 17.684 r_dihedral_angle_3_deg 12.098 r_dihedral_angle_1_deg 5.431 r_scangle_it 2.995 r_scbond_it 1.767 r_angle_refined_deg 1.113 r_mcangle_it 1.02 r_mcbond_it 0.518 r_chiral_restr 0.084
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.787 r_dihedral_angle_4_deg 17.684 r_dihedral_angle_3_deg 12.098 r_dihedral_angle_1_deg 5.431 r_scangle_it 2.995 r_scbond_it 1.767 r_angle_refined_deg 1.113 r_mcangle_it 1.02 r_mcbond_it 0.518 r_chiral_restr 0.084 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11175 Nucleic Acid Atoms Solvent Atoms 585 Heterogen Atoms 73
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling SHELX phasing