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Crystal structure of the Titin M10-Obscurin like 1 Ig complex in space group P1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WP3 PDB ENTRY 2WP3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 0.1 M MIB BUFFER PH 5.0, 25% PEG 1500
Crystal Properties Matthews coefficient Solvent content 2.49 50.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.65 α = 87.29 b = 44.94 β = 86.91 c = 68.01 γ = 68.79
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2009-08-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 36.13 92.6 0.06 13.2 3.8 17094 47.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 93.1 0.25 4.3 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2WP3 2.3 35.88 16215 879 92.66 0.19997 0.19718 0.2119 0.25219 0.2689 RANDOM 17.149
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.16 -1.11 0.03 3.93 -1.46 -1.83
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.294 r_dihedral_angle_4_deg 14.645 r_dihedral_angle_3_deg 14.096 r_dihedral_angle_1_deg 5.837 r_scangle_it 1.494 r_angle_refined_deg 1.235 r_scbond_it 0.96 r_angle_other_deg 0.787 r_mcangle_it 0.563 r_mcbond_it 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.294 r_dihedral_angle_4_deg 14.645 r_dihedral_angle_3_deg 14.096 r_dihedral_angle_1_deg 5.837 r_scangle_it 1.494 r_angle_refined_deg 1.235 r_scbond_it 0.96 r_angle_other_deg 0.787 r_mcangle_it 0.563 r_mcbond_it 0.305 r_mcbond_other 0.078 r_chiral_restr 0.07 r_bond_refined_d 0.01 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2917 Nucleic Acid Atoms Solvent Atoms 113 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling MOLREP phasing