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Est1E from Butyrivibrio proteoclasticus
Crystallization Crystal Properties Matthews coefficient Solvent content 2.08 40.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.035 α = 90 b = 109.067 β = 102.18 c = 91.647 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 50 99.4 0.08 13.7 2.8 124101 2 16.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.65 99.6 0.35 4.8 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 89.44 124101 6580 99.42 0.15793 0.15604 0.171 0.1941 0.2088 RANDOM 15.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.57 -0.82 -0.32 -0.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.258 r_dihedral_angle_4_deg 16.571 r_dihedral_angle_3_deg 12.21 r_dihedral_angle_1_deg 6.157 r_scangle_it 4.569 r_scbond_it 3.333 r_mcangle_it 1.92 r_angle_refined_deg 1.905 r_mcbond_it 1.647 r_angle_other_deg 0.957
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.258 r_dihedral_angle_4_deg 16.571 r_dihedral_angle_3_deg 12.21 r_dihedral_angle_1_deg 6.157 r_scangle_it 4.569 r_scbond_it 3.333 r_mcangle_it 1.92 r_angle_refined_deg 1.905 r_mcbond_it 1.647 r_angle_other_deg 0.957 r_mcbond_other 0.39 r_symmetry_hbond_refined 0.264 r_nbd_refined 0.236 r_symmetry_vdw_other 0.225 r_xyhbond_nbd_refined 0.199 r_symmetry_vdw_refined 0.195 r_nbd_other 0.185 r_nbtor_refined 0.184 r_chiral_restr 0.127 r_nbtor_other 0.088 r_bond_refined_d 0.022 r_gen_planes_refined 0.01 r_gen_planes_other 0.002 r_bond_other_d 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7647 Nucleic Acid Atoms Solvent Atoms 886 Heterogen Atoms 66
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling PHASER phasing