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GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating iodide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 2.4 M (NH4)2HPO4, 100 MM TRIS PH 8.5
Crystal Properties Matthews coefficient Solvent content 2 39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.34 α = 90 b = 56.34 β = 90 c = 56.34 γ = 90
Symmetry Space Group I 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 18 99.4 0.03 16.3 2.83 6605 23.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.35 1.44 99.7 0.5 2.08 2.76
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.36 17.85 6254 331 99.67 0.14359 0.14154 0.148 0.18378 0.1941 RANDOM 16.774
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.842 r_dihedral_angle_3_deg 13.091 r_scangle_it 7.692 r_scbond_it 5.215 r_mcangle_it 4.541 r_dihedral_angle_1_deg 4.426 r_mcbond_it 3.155 r_dihedral_angle_4_deg 2.869 r_sphericity_free 2.768 r_sphericity_bonded 2.552
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.842 r_dihedral_angle_3_deg 13.091 r_scangle_it 7.692 r_scbond_it 5.215 r_mcangle_it 4.541 r_dihedral_angle_1_deg 4.426 r_mcbond_it 3.155 r_dihedral_angle_4_deg 2.869 r_sphericity_free 2.768 r_sphericity_bonded 2.552 r_rigid_bond_restr 2.067 r_mcbond_other 1.751 r_angle_refined_deg 0.876 r_angle_other_deg 0.859 r_chiral_restr 0.045 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 241 Nucleic Acid Atoms Solvent Atoms 58 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling SHELX phasing