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Crystal structure of the tyrosine phosphatase Wzb from Escherichia coli K30 in complex with sulphate.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WJA PDB ENTRY 2WJA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1M TRIS-CL PH 8.5, 1.2 M LI2SO4, 0.01M NICL2
Crystal Properties Matthews coefficient Solvent content 2.26 45.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.902 α = 90 b = 53.062 β = 90.01 c = 113.909 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2009-06-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 34 96.5 0.09 20.1 3.4 59360 27.97
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.21 2.25 80.8 0.42 3.2 2.7
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 2WJA 2.211 33.967 1.33 59360 2987 96.51 0.2091 0.2063 0.1951 0.2606 0.2496
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.4497 0.2166 6.3795 -4.9299
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 16.353 f_angle_d 0.884 f_chiral_restr 0.064 f_bond_d 0.005 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9021 Nucleic Acid Atoms Solvent Atoms 592 Heterogen Atoms 62
Software Software Software Name Purpose PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing