☰ Navigation Tabs
NanC porin structure in rhombohedral crystal form.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 295 0.1M HEPES PH 7.5, 52% PEG400, VAPOR DIFFUSION, 295K
Crystal Properties Matthews coefficient Solvent content 2.7 54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.901 α = 90 b = 74.901 β = 90 c = 126.41 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 45 99.9 0.09 12.5 3.3 24521 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 99.9 0.32 2.3 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 50 23265 1254 99.88 0.19527 0.19354 0.1961 0.22963 RANDOM 22.613
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.75 0.88 1.75 -2.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.801 r_dihedral_angle_4_deg 19.663 r_dihedral_angle_3_deg 12.398 r_dihedral_angle_1_deg 6.206 r_scangle_it 3.037 r_scbond_it 1.929 r_mcangle_it 1.345 r_angle_refined_deg 1.315 r_angle_other_deg 0.88 r_mcbond_it 0.726
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.801 r_dihedral_angle_4_deg 19.663 r_dihedral_angle_3_deg 12.398 r_dihedral_angle_1_deg 6.206 r_scangle_it 3.037 r_scbond_it 1.929 r_mcangle_it 1.345 r_angle_refined_deg 1.315 r_angle_other_deg 0.88 r_mcbond_it 0.726 r_mcbond_other 0.166 r_chiral_restr 0.078 r_bond_refined_d 0.011 r_bond_other_d 0.006 r_gen_planes_refined 0.005 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1715 Nucleic Acid Atoms Solvent Atoms 113 Heterogen Atoms 67
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing