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NanC porin structure in hexagonal crystal form.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 295 5-10% ISOPROPANOL, 0.15M CACL2, 0.1M ACETATE PH 4.6, VAPOR DIFFUSION, 295K
Crystal Properties Matthews coefficient Solvent content 3.2 62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.823 α = 90 b = 96.823 β = 90 c = 121.253 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 98.6 0.09 19.2 9.9 22890 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 97.9 0.41 5.7 10.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT NONE 2 50 21713 1178 98.09 0.19232 0.19111 0.2066 0.21412 RANDOM 17.728
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.12 -0.06 -0.12 0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.074 r_dihedral_angle_4_deg 15.508 r_dihedral_angle_3_deg 11.359 r_dihedral_angle_1_deg 6.182 r_scangle_it 3.522 r_scbond_it 2.216 r_mcangle_it 1.392 r_angle_refined_deg 1.332 r_angle_other_deg 0.739 r_mcbond_it 0.698
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.074 r_dihedral_angle_4_deg 15.508 r_dihedral_angle_3_deg 11.359 r_dihedral_angle_1_deg 6.182 r_scangle_it 3.522 r_scbond_it 2.216 r_mcangle_it 1.392 r_angle_refined_deg 1.332 r_angle_other_deg 0.739 r_mcbond_it 0.698 r_mcbond_other 0.181 r_chiral_restr 0.084 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1705 Nucleic Acid Atoms Solvent Atoms 136 Heterogen Atoms 138
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHELXD phasing SHARP phasing REFMAC refinement