☰ Navigation Tabs
FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WBB PDB ENTRY 2WBB
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1M AMMONIUM ACETATE, 0.1M HEPES PH 7.0, 15% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.8 55.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.842 α = 90 b = 285.402 β = 97.57 c = 83.552 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD MARRESEARCH 2005-11-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 99.1 0.1 8.28 1.95 237087
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.5 98.6 0.49 2.4 1.95
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2WBB 2.4 20 114172 6014 99.97 0.22276 0.21987 0.2159 0.27684 0.2717 RANDOM 30.684
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.4 -0.07 -0.88 -2.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.973 r_dihedral_angle_3_deg 18.046 r_dihedral_angle_4_deg 16.442 r_dihedral_angle_1_deg 5.998 r_scangle_it 2.621 r_scbond_it 1.593 r_angle_refined_deg 1.348 r_mcangle_it 1.145 r_mcbond_it 0.602 r_chiral_restr 0.089
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.973 r_dihedral_angle_3_deg 18.046 r_dihedral_angle_4_deg 16.442 r_dihedral_angle_1_deg 5.998 r_scangle_it 2.621 r_scbond_it 1.593 r_angle_refined_deg 1.348 r_mcangle_it 1.145 r_mcbond_it 0.602 r_chiral_restr 0.089 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 19440 Nucleic Acid Atoms Solvent Atoms 534 Heterogen Atoms 168
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling