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FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FTA PDB ENTRY 1FTA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1M AMMONIUM ACETATE 0.1M HEPES PH7 25% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.6 52.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.73 α = 90 b = 278.563 β = 97.87 c = 82.702 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD MARRESEARCH 2005-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 30 95.3 0.07 13.15 3.4 137428
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.21 2.34 71.8 0.32 2.2 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1FTA 2.22 29.7 130547 6881 96 0.202 0.199 0.1987 0.248 0.2465 RANDOM 31.08
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.18 -0.13 0.05 -2.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.929 r_dihedral_angle_3_deg 16.822 r_dihedral_angle_4_deg 15.284 r_dihedral_angle_1_deg 6.174 r_scangle_it 2.556 r_scbond_it 1.703 r_angle_refined_deg 1.316 r_mcangle_it 1.129 r_mcbond_it 0.652 r_symmetry_vdw_refined 0.319
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.929 r_dihedral_angle_3_deg 16.822 r_dihedral_angle_4_deg 15.284 r_dihedral_angle_1_deg 6.174 r_scangle_it 2.556 r_scbond_it 1.703 r_angle_refined_deg 1.316 r_mcangle_it 1.129 r_mcbond_it 0.652 r_symmetry_vdw_refined 0.319 r_nbtor_refined 0.304 r_symmetry_hbond_refined 0.255 r_nbd_refined 0.212 r_xyhbond_nbd_refined 0.149 r_chiral_restr 0.085 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 19440 Nucleic Acid Atoms Solvent Atoms 682 Heterogen Atoms 160
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling MOLREP phasing