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Crystal Structure of human GADD45gamma
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 2 M MALONATE, 0.1 M BENZONATE, PH 5.5
Crystal Properties Matthews coefficient Solvent content 3.69 66.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 108.717 α = 90 b = 108.717 β = 90 c = 73.371 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2005-03-12 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.2 BESSY 14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 20 93 0.07 18.7 7.09 21647
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 20 80.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 2.4 19.81 18783 988 100 0.216 0.215 0.2309 0.251 0.2643 RANDOM 48.03
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.95 0.48 0.95 -1.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.823 r_dihedral_angle_3_deg 18.656 r_dihedral_angle_4_deg 13.275 r_dihedral_angle_1_deg 6.97 r_scangle_it 6.219 r_scbond_it 4.727 r_mcangle_it 2.948 r_mcbond_it 2.236 r_angle_refined_deg 1.308 r_angle_other_deg 0.906
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.823 r_dihedral_angle_3_deg 18.656 r_dihedral_angle_4_deg 13.275 r_dihedral_angle_1_deg 6.97 r_scangle_it 6.219 r_scbond_it 4.727 r_mcangle_it 2.948 r_mcbond_it 2.236 r_angle_refined_deg 1.308 r_angle_other_deg 0.906 r_symmetry_vdw_other 0.255 r_nbd_refined 0.233 r_symmetry_vdw_refined 0.203 r_nbd_other 0.194 r_nbtor_refined 0.177 r_xyhbond_nbd_refined 0.151 r_symmetry_hbond_refined 0.145 r_nbtor_other 0.087 r_chiral_restr 0.075 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2142 Nucleic Acid Atoms Solvent Atoms 54 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALEPACK data scaling