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Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 pH 7
Crystal Properties Matthews coefficient Solvent content 2.3 48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 28.08 α = 97.44 b = 28.23 β = 106.45 c = 38.91 γ = 92.39
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD MARRESEARCH MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 30 91.1 0.04 12.4 2.1 11540 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.7 25 10925 574 100 0.228 0.226 0.2356 0.254 0.2574 RANDOM 22.07
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.78 -0.38 1.15 -0.66 -0.33 1.97
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.382 r_dihedral_angle_4_deg 22.223 r_dihedral_angle_3_deg 16.099 r_dihedral_angle_1_deg 6.005 r_scangle_it 2.223 r_scbond_it 1.53 r_angle_refined_deg 1.193 r_mcangle_it 1.099 r_mcbond_it 0.699 r_nbtor_refined 0.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.382 r_dihedral_angle_4_deg 22.223 r_dihedral_angle_3_deg 16.099 r_dihedral_angle_1_deg 6.005 r_scangle_it 2.223 r_scbond_it 1.53 r_angle_refined_deg 1.193 r_mcangle_it 1.099 r_mcbond_it 0.699 r_nbtor_refined 0.302 r_symmetry_vdw_refined 0.228 r_nbd_refined 0.204 r_symmetry_hbond_refined 0.181 r_xyhbond_nbd_refined 0.124 r_chiral_restr 0.081 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 856 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling