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Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1 M LITHIUM SULPHATE, 0.1 M TRI-SODIUM CITRATE AT PH 5.6 AND 12% W/V POLYETHYLENE GLYCOL (PEG) 4000
Crystal Properties Matthews coefficient Solvent content 2.92 57.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 235.75 α = 90 b = 235.75 β = 90 c = 61.75 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 47.6 99.8 0.01 8.99 3.63 117179
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 100 0.05 3.19 3.61
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2 47.57 111098 5865 99.6 0.177 0.175 0.214 0.1989 RANDOM 15.84
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.07 0.07 -0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.027 r_dihedral_angle_4_deg 19.658 r_dihedral_angle_3_deg 12.241 r_dihedral_angle_1_deg 6.783 r_scangle_it 2.79 r_scbond_it 1.871 r_angle_refined_deg 1.487 r_mcangle_it 1.278 r_mcbond_it 1.064 r_angle_other_deg 0.951
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.027 r_dihedral_angle_4_deg 19.658 r_dihedral_angle_3_deg 12.241 r_dihedral_angle_1_deg 6.783 r_scangle_it 2.79 r_scbond_it 1.871 r_angle_refined_deg 1.487 r_mcangle_it 1.278 r_mcbond_it 1.064 r_angle_other_deg 0.951 r_symmetry_vdw_other 0.219 r_nbd_other 0.203 r_nbd_refined 0.196 r_mcbond_other 0.185 r_nbtor_refined 0.176 r_symmetry_hbond_refined 0.159 r_xyhbond_nbd_refined 0.156 r_chiral_restr 0.095 r_symmetry_vdw_refined 0.09 r_nbtor_other 0.083 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9216 Nucleic Acid Atoms Solvent Atoms 1177 Heterogen Atoms 62
Software Software Software Name Purpose XDS data reduction SHELXD phasing SHARP phasing REFMAC refinement