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Structure of PKA-PKB chimera complexed with C-(4-(4-Chlorophenyl)-1-(7H-pyrrolo(2,3-d)pyrimidin-4-yl)piperidin-4-yl)methylamine
Crystallization Crystal Properties Matthews coefficient Solvent content 2.35 47.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.124 α = 90 b = 74.477 β = 90 c = 79.933 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.98 33 97.2 0.05 2.4 28726
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.98 2.08 90.2 0.23 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.98 33.18 28726 1538 97.4 0.189 0.186 0.1947 0.246 0.2508 RANDOM 21.51
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.76 0.42 -1.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.806 r_dihedral_angle_4_deg 22.249 r_dihedral_angle_3_deg 14.466 r_dihedral_angle_1_deg 5.644 r_angle_refined_deg 1.299 r_angle_other_deg 0.887 r_symmetry_vdw_other 0.278 r_nbd_refined 0.204 r_nbd_other 0.194 r_nbtor_refined 0.184
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.806 r_dihedral_angle_4_deg 22.249 r_dihedral_angle_3_deg 14.466 r_dihedral_angle_1_deg 5.644 r_angle_refined_deg 1.299 r_angle_other_deg 0.887 r_symmetry_vdw_other 0.278 r_nbd_refined 0.204 r_nbd_other 0.194 r_nbtor_refined 0.184 r_symmetry_hbond_refined 0.122 r_scangle_it 0.121 r_xyhbond_nbd_refined 0.108 r_mcangle_it 0.101 r_scbond_it 0.098 r_nbtor_other 0.083 r_chiral_restr 0.08 r_mcbond_it 0.077 r_symmetry_vdw_refined 0.065 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2945 Nucleic Acid Atoms Solvent Atoms 341 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement