2VG5

Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors

X-RAY DIFFRACTION

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Crystallization

Crystal Properties
Matthews coefficient	Solvent content
3.25	61.9

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 118.863	α = 90
b = 156.127	β = 90
c = 154.569	γ = 90

Symmetry
Space Group	C 2 2 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MARRESEARCH			M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	MAX II BEAMLINE I711		MAX II	I711

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.8	20	89.8	0.08		1.9		31949		2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2.8	20	30107	1589	89	0.24	0.237	0.297	RANDOM	45.11

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.64			-0.85		2.49

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.072
r_dihedral_angle_3_deg	17.332
r_dihedral_angle_4_deg	16.587
r_dihedral_angle_1_deg	4.952
r_scangle_it	2.415
r_scbond_it	1.636
r_mcangle_it	1.552
r_mcbond_it	0.819
r_angle_refined_deg	0.619
r_symmetry_hbond_refined	0.37
r_nbtor_refined	0.341
r_symmetry_vdw_refined	0.333
r_nbd_refined	0.327
r_xyhbond_nbd_refined	0.243
r_chiral_restr	0.051
r_gen_planes_refined	0.004
r_bond_refined_d	0.003
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	7793
Nucleic Acid Atoms
Solvent Atoms	55
Heterogen Atoms	24

Software

Software
Software Name	Purpose
REFMAC	refinement