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Coiled-coil region of NudEL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 18-22% TERT-BUTANOL, 100 MM SODIUM CITRATE PH 6.0, 10 MM COCL2, AND 10 MM SPERMINE. BEFORE FREEZING, TERT-BUTANOL WAS SLOWLY EXCHANGED FOR 30% MPD
Crystal Properties Matthews coefficient Solvent content 5.65 56.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.872 α = 90 b = 44.975 β = 97.35 c = 124.377 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE RIGAKU IMAGE PLATE MIRRORS 2005-12-15 M SINGLE WAVELENGTH 2 1 x-ray IMAGE PLATE M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 2 SYNCHROTRON APS BEAMLINE 22-ID 0.97928, 0.97945, 0.97175 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25 50 96.2 0.08 9.8 3.9 23115
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.25 2.33 94.7 0.47 2.34 3.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 2.24 123.09 21863 1172 95.3 0.255 0.253 0.2526 0.29 0.288 RANDOM 56.69
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.938 r_dihedral_angle_3_deg 16.877 r_dihedral_angle_4_deg 13.55 r_dihedral_angle_1_deg 4.19 r_angle_refined_deg 2.367 r_angle_other_deg 1.463 r_symmetry_hbond_refined 0.228 r_nbd_refined 0.223 r_symmetry_vdw_other 0.222 r_symmetry_vdw_refined 0.214
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.938 r_dihedral_angle_3_deg 16.877 r_dihedral_angle_4_deg 13.55 r_dihedral_angle_1_deg 4.19 r_angle_refined_deg 2.367 r_angle_other_deg 1.463 r_symmetry_hbond_refined 0.228 r_nbd_refined 0.223 r_symmetry_vdw_other 0.222 r_symmetry_vdw_refined 0.214 r_nbtor_refined 0.182 r_nbd_other 0.143 r_xyhbond_nbd_refined 0.096 r_nbtor_other 0.088 r_chiral_restr 0.086 r_bond_refined_d 0.011 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2671 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing