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Stractural insight into the interaction between ESCRT-III and Vps4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 0.1M HEPES(PH7.0), 2.0M AMMONIUM SULFATE
Crystal Properties Matthews coefficient Solvent content 2.2 36.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.145 α = 90 b = 82.27 β = 90 c = 21.474 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD MARRESEARCH 2007-01-26 M MAD 2 1 x-ray CCD ADSC CCD M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.8726, 0.9392 ESRF ID23-1 2 SYNCHROTRON ESRF BEAMLINE ID23-2 0.9792, 0.9796 ESRF ID23-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 56.61 99.8 0.12 13.4 5.23 9997 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.02 100 0.44 4.28 5.31
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT NONE 1.98 56.61 9483 477 98.6 0.2 0.198 0.1998 0.228 0.2334 RANDOM 19.98
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.95 1.52 -0.57
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.799 r_dihedral_angle_3_deg 15.331 r_dihedral_angle_4_deg 8.964 r_dihedral_angle_1_deg 5.193 r_scangle_it 3.85 r_scbond_it 2.731 r_mcangle_it 1.372 r_angle_refined_deg 1.334 r_mcbond_it 0.934 r_symmetry_vdw_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.799 r_dihedral_angle_3_deg 15.331 r_dihedral_angle_4_deg 8.964 r_dihedral_angle_1_deg 5.193 r_scangle_it 3.85 r_scbond_it 2.731 r_mcangle_it 1.372 r_angle_refined_deg 1.334 r_mcbond_it 0.934 r_symmetry_vdw_refined 0.305 r_nbtor_refined 0.291 r_nbd_refined 0.201 r_chiral_restr 0.104 r_symmetry_hbond_refined 0.102 r_xyhbond_nbd_refined 0.095 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 979 Nucleic Acid Atoms Solvent Atoms 32 Heterogen Atoms 5
Software Software Software Name Purpose SCALA data reduction TRUNCATE data scaling SHARP phasing ARP/wARP phasing REFMAC refinement