☰ Navigation Tabs
IspE in complex with ligand
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 PROTEIN 30 MG ML-1, RESERVOIR = 1.6 M (NH4)2SO4, 0.1 M NA CACODYLATE, PH 6.5, 0.1 M NABR
Crystal Properties Matthews coefficient Solvent content 3.6 65.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 137.038 α = 90 b = 137.038 β = 90 c = 137.038 γ = 90
Symmetry Space Group P 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU IMAGE PLATE MIRRORS 2006-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 96.7 99.9 0.08 15 5.4 38321 2 45.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.36 100 0.58 2.7 5.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.3 96.67 38263 1918 99.9 0.212 0.211 0.234 RANDOM 36.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.063 r_dihedral_angle_4_deg 21.042 r_dihedral_angle_3_deg 15.011 r_dihedral_angle_1_deg 5.612 r_scangle_it 1.692 r_angle_refined_deg 1.122 r_scbond_it 1.026 r_mcangle_it 0.912 r_mcbond_it 0.51 r_nbtor_refined 0.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.063 r_dihedral_angle_4_deg 21.042 r_dihedral_angle_3_deg 15.011 r_dihedral_angle_1_deg 5.612 r_scangle_it 1.692 r_angle_refined_deg 1.122 r_scbond_it 1.026 r_mcangle_it 0.912 r_mcbond_it 0.51 r_nbtor_refined 0.302 r_symmetry_vdw_refined 0.187 r_nbd_refined 0.183 r_xyhbond_nbd_refined 0.153 r_symmetry_hbond_refined 0.149 r_chiral_restr 0.066 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4237 Nucleic Acid Atoms Solvent Atoms 347 Heterogen Atoms 104
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling REFMAC phasing