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CRYSTAL STRUCTURE OF RAT TOM20-ALDH PRESEQUENCE COMPLEX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 PEG 6000, AMMONIUM CHLORIDE, PH 7.0
Crystal Properties Matthews coefficient Solvent content 1.7 30
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.629 α = 90 b = 27.639 β = 103.07 c = 70.967 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2004-03-04 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL40B2 SPring-8 BL40B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 98.9 0.06 24.2 3.1 9958
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.98 93.2 0.19 8.4 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.92 32.6 8906 879 97.5 0.184 0.178 0.1838 0.24 0.2422 RANDOM 14.86
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.12 0.37 -0.07 -0.89
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.479 r_dihedral_angle_4_deg 17.881 r_dihedral_angle_3_deg 17.369 r_dihedral_angle_1_deg 5.08 r_scangle_it 2.874 r_scbond_it 2.124 r_angle_refined_deg 1.423 r_mcbond_it 1.121 r_mcangle_it 1.116 r_angle_other_deg 1.032
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.479 r_dihedral_angle_4_deg 17.881 r_dihedral_angle_3_deg 17.369 r_dihedral_angle_1_deg 5.08 r_scangle_it 2.874 r_scbond_it 2.124 r_angle_refined_deg 1.423 r_mcbond_it 1.121 r_mcangle_it 1.116 r_angle_other_deg 1.032 r_symmetry_vdw_other 0.275 r_nbd_refined 0.22 r_xyhbond_nbd_refined 0.219 r_symmetry_vdw_refined 0.204 r_symmetry_hbond_refined 0.182 r_nbd_other 0.172 r_nbtor_refined 0.165 r_nbtor_other 0.098 r_chiral_restr 0.085 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1279 Nucleic Acid Atoms Solvent Atoms 168 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing