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TtgR in complex with Quercetin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.2 M MGCL2, 0.1 M BIS-TRIS PH 6.5, 25% (V/V) PEG3350
Crystal Properties Matthews coefficient Solvent content 2.48 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.65 α = 90 b = 231.881 β = 90 c = 44.33 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 96.6 0.09 5 4.9 16721 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 0.38 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 44.32 15448 1273 84.8 0.242 0.237 0.2314 0.295 0.2953 RANDOM 51.24
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.43 -1.42 -1.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.112 r_dihedral_angle_4_deg 22.221 r_dihedral_angle_3_deg 20.942 r_dihedral_angle_1_deg 6.5 r_angle_refined_deg 1.563 r_mcangle_it 0.927 r_scangle_it 0.801 r_scbond_it 0.641 r_mcbond_it 0.635 r_symmetry_hbond_refined 0.359
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.112 r_dihedral_angle_4_deg 22.221 r_dihedral_angle_3_deg 20.942 r_dihedral_angle_1_deg 6.5 r_angle_refined_deg 1.563 r_mcangle_it 0.927 r_scangle_it 0.801 r_scbond_it 0.641 r_mcbond_it 0.635 r_symmetry_hbond_refined 0.359 r_symmetry_vdw_refined 0.322 r_nbtor_refined 0.299 r_nbd_refined 0.279 r_xyhbond_nbd_refined 0.223 r_chiral_restr 0.159 r_bond_refined_d 0.014 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3200 Nucleic Acid Atoms Solvent Atoms 191 Heterogen Atoms 44
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling CNS phasing