☰ Navigation Tabs
Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(5- Cyclopropyl-1H-pyrazol-3-ylamino)-quinazolin-2-ylamino)-phenyl)- acetonitrile
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2J51 PDB ENTRY 2J51
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 18% PEG3350, 0.15M POTASSIUM THIOCYANATE, 10% ETHYLENE GLYCOL, 0.1M BISTRISPROPANE PH6.5, pH 6.50
Crystal Properties Matthews coefficient Solvent content 3.53 65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.26 α = 90 b = 101.26 β = 90 c = 176.471 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2006-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 60 99.3 0.1 14.2 8.4 24390 50
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 95.2 0.86 2.1 6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2J51 2.3 60 23095 1232 99.3 0.199 0.198 0.1949 0.234 0.2281 RANDOM 44.92
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.28 -0.14 -0.28 0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.712 r_dihedral_angle_4_deg 25.1 r_dihedral_angle_3_deg 13.047 r_dihedral_angle_1_deg 5.886 r_scangle_it 1.856 r_angle_refined_deg 1.282 r_scbond_it 1.257 r_angle_other_deg 0.953 r_mcangle_it 0.848 r_mcbond_it 0.507
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.712 r_dihedral_angle_4_deg 25.1 r_dihedral_angle_3_deg 13.047 r_dihedral_angle_1_deg 5.886 r_scangle_it 1.856 r_angle_refined_deg 1.282 r_scbond_it 1.257 r_angle_other_deg 0.953 r_mcangle_it 0.848 r_mcbond_it 0.507 r_symmetry_vdw_other 0.277 r_nbd_other 0.184 r_nbd_refined 0.179 r_nbtor_refined 0.168 r_symmetry_hbond_refined 0.15 r_xyhbond_nbd_refined 0.134 r_symmetry_vdw_refined 0.093 r_nbtor_other 0.089 r_chiral_restr 0.073 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2253 Nucleic Acid Atoms Solvent Atoms 148 Heterogen Atoms 55
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling