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Complex structure of the zf-CW domain and the H3K4me3 peptide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 20mM D-tris-HCl(PH 7.0); 100mM NaCl; 0.02% D-DTT; 50micro-M ZNCl2+1mM IDA; 10% D2O, 90% H2O 90% H2O/10% D2O 120 7.0 ambient 298 2 3D 1H-13C NOESY 20mM D-tris-HCl(PH 7.0); 100mM NaCl; 0.02% D-DTT; 50micro-M ZNCl2+1mM IDA; 10% D2O, 90% H2O 90% H2O/10% D2O 120 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker DRX 800
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 5.0 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 3 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich 4 refinement Amber 9.0 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm 5 data analysis NMRView 5.0 Johnson, One Moon Scientific 6 collection XwinNMR 3.0 Bruker Biospin 7 data analysis KUJIRA 0.9839 Naohiro Kobayashi