2RQF

Solution structure of juvenile hormone binding protein from silkworm in complex with JH III

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.6-1.0 mM [U-15N] hJHBP-1, 0.6-1.0 mM JH III-2, 45 mM sodium phosphate-3, 90 % H2O-4, 10 % D2O-5	90% H2O/10% D2O		6.0	ambient	308
2	2D 1H-15N HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
3	2D 1H-13C HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
4	3D HNCO	0.6-1.0 mM [U-13C; U-15N] hJHBP-6, 0.6-1.0 mM JH III-7, 45 mM sodium phosphate-8, 90 % H2O-9, 10 % D2O-10	90% H2O/10% D2O		6.0	ambient	308
5	3D CBCA(CO)NH	0.6-1.0 mM [U-13C; U-15N] hJHBP-6, 0.6-1.0 mM JH III-7, 45 mM sodium phosphate-8, 90 % H2O-9, 10 % D2O-10	90% H2O/10% D2O		6.0	ambient	308
6	3D HNCA	0.6-1.0 mM [U-13C; U-15N] hJHBP-6, 0.6-1.0 mM JH III-7, 45 mM sodium phosphate-8, 90 % H2O-9, 10 % D2O-10	90% H2O/10% D2O		6.0	ambient	308
7	3D HCABGCO	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
8	3D HCCH-TOCSY	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
9	3D 15N-separated HOHAHA-HSQC	0.6-1.0 mM [U-15N] hJHBP-1, 0.6-1.0 mM JH III-2, 45 mM sodium phosphate-3, 90 % H2O-4, 10 % D2O-5	90% H2O/10% D2O		6.0	ambient	308
10	3D 15N-separated NOESY-HSQC	0.6-1.0 mM [U-15N] hJHBP-1, 0.6-1.0 mM JH III-2, 45 mM sodium phosphate-3, 90 % H2O-4, 10 % D2O-5	90% H2O/10% D2O		6.0	ambient	308
11	3D 13C/15N-separated NOESY-HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
12	3D 13C-separated NOESY-HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
13	3D 13C/13C-separated NOESY-HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
14	2D 13C-filtered COSY	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
15	2D 13C-filtered NOESY	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308
16	3D 13C-filtered/13C-selected NOESY-HSQC	0.6-1.0 mM [U-13C; U-15N] hJHBP-11, 0.6-1.0 mM JH III-12, 45 mM sodium phosphate-13, 100 % D2O-14	100% D2O		6.0	ambient	308

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DMX	750

NMR Refinement
Method	Details	Software
torsion angle dynamics		xwinnmr

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	xwinnmr	3.1	Bruker Biospin
2	processing	NMRPipe	released at Feb 10, 2006	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	peak picking	SPARKY	3.113	Goddard
4	chemical shift assignment	SPARKY	3.113	Goddard
5	data analysis	TALOS	2003.027.13.05	Cornilescu, Delaglio and Bax
6	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
7	refinement	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
8	data analysis	AQUA	3.2	Rullmann, Doreleijers and Kaptein
9	data analysis	ProcheckNMR	3.5.4	Laskowski and MacArthur

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.