☰ Navigation Tabs
The solution structure of N-terminal domain of microtubule severing enzyme
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 20 6.5 ambient 298 2 3D HNCACB 0.5mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 20 6.5 ambient 298 3 3D HNCA 0.5mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 20 6.5 ambient 298 4 3D CBCA(CO)NH 0.5mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 20 6.5 ambient 298 5 3D HNCO 0.5mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 20 6.5 ambient 298 6 3D CC(CO)NH 0.7mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 50mM sodium chloride; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 70 6.5 ambient 298 7 3D HCC(CO)NH 0.7mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 50mM sodium chloride; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 70 6.5 ambient 298 8 3D 15N-edited NOESY 0.7mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 50mM sodium chloride; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 70 6.5 ambient 298 9 3D 13C-edited NOESY 0.7mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 50mM sodium chloride; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 70 6.5 ambient 298 10 3D HCCH-TOCSY 0.7mM [U-13C; U-15N] katanin p60; 20mM sodium phosphate; 50mM sodium chloride; 1mM EDTA; 95% H2O/5% D2O 95% H2O/5% D2O 70 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DRX 800 3 Varian INOVA 900
NMR Refinement Method Details Software distance geometry, rigid body restrained molecular dynamics, dihedral angle molecular dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.0.17 Guntert, Mumenthaler and Wuthrich 2 refinement CYANA 2.0.17 Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment MOLMOL 2K.2 Koradi, Billeter and Wuthrich 4 refinement MOLMOL 2K.2 Koradi, Billeter and Wuthrich 5 refinement Sparky 3.106 Goddard 6 chemical shift assignment Sparky 3.106 Goddard 7 collection XwinNMR 3.5 Bruker Biospin 8 processing NMRPipe 2.3 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax