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Solution structure of the C-terminal acidic domain of TFIIE alpha
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY 1-2mM TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 2 2D 1H-1H TOCSY 1-2mM TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 3 2D 1H-1H NOESY 1-2mM TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 4 2D DQF-COSY 1-2mM TFIIE-ALPHA 100% D2O 0 6.5 ambient 295 5 2D 1H-1H TOCSY 1-2mM TFIIE-ALPHA 100% D2O 0 6.5 ambient 295 6 2D 1H-1H NOESY 1-2mM TFIIE-ALPHA 100% D2O 0 6.5 ambient 295 7 2D 1H-15N HSQC 1-2mM [U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 8 3D 1H-15N TOCSY 1-2mM [U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 9 3D 1H-15N NOESY 1-2mM [U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 10 3D HNCACB 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 11 3D CBCA(CO)NH 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 12 3D HNCO 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 13 3D C(CO)NH 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 14 3D H(CCO)NH 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 15 3D HNHB 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 16 3D HNHA 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 90% H2O/10% D2O 0 6.5 ambient 295 17 2D 1H-13C HSQC 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 100% D2O 0 6.5 ambient 295 18 3D HCCH-TOCSY 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 100% D2O 0 6.5 ambient 295 19 3D 1H-13C NOESY 1-2mM [U-100% 13C; U-100% 15N] TFIIE-ALPHA 100% D2O 0 6.5 ambient 295
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 500
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing, simulated annealing refinement with water XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR Bruker Biospin 2 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 peak picking NMRView Johnson, One Moon Scientific 4 chemical shift assignment NMRView Johnson, One Moon Scientific 5 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 6 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 7 data analysis MOLMOL Koradi, Billeter and Wuthrich 8 data analysis ProcheckNMR Laskowski and MacArthur